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Code

cookbook/tools/pubmed_tools.py
from agno.agent import Agent
from agno.tools.pubmed import PubMedTools

agent = Agent(
    tools=[PubMedTools()],
    show_tool_calls=True,
    markdown=True,
)
agent.print_response("Find recent research papers about COVID-19 vaccines")

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Usage

1

Create a virtual environment

Open the Terminal and create a python virtual environment.
python3 -m venv .venv
source .venv/bin/activate
2

Set your API key

export OPENAI_API_KEY=xxx
3

Install libraries

pip install -U biopython openai agno
4

Run Agent

python cookbook/tools/pubmed_tools.py